Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative zn-dependent protease, contains tpr repeats | SAMN05216241_104175 | Not Available | Negative | 1669555 - 1670934 | 50335.4 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05216241_104176 | Not Available | Positive | 1671025 - 1672605 | 53807.0 |
| phytoene synthase | SAMN05216241_104177 | Not Available | Positive | 1672745 - 1673668 | 32803.5 |
| t5orf172 domain-containing protein | SAMN05216241_104178 | Not Available | Negative | 1673672 - 1674097 | 15828.6 |
| hypothetical protein | SAMN05216241_104179 | Not Available | Negative | 1674303 - 1674650 | 12271.0 |
| restriction system protein | SAMN05216241_104180 | Not Available | Negative | 1674726 - 1675739 | 37391.4 |
| hypothetical protein | SAMN05216241_104181 | Not Available | Negative | 1676224 - 1676478 | 8641.21 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05216241_104182 | Not Available | Negative | 1676499 - 1677698 | 46462.7 |
| type ii restriction/modification system, dna methylase subunit yeea | SAMN05216241_104183 | Not Available | Negative | 1677691 - 1680555 | 107622.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05216241_104184 | Not Available | Negative | 1680784 - 1681713 | 32271.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
