Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05216241_103153 | Not Available | Negative | 1354915 - 1355670 | 27297.2 |
| dna-binding transcriptional regulator, gntr family | SAMN05216241_103154 | Not Available | Negative | 1355667 - 1356341 | 24404.9 |
| predicted hd phosphohydrolase | SAMN05216241_103155 | Not Available | Negative | 1356365 - 1356967 | 23334.2 |
| glycine betaine/proline transport system substrate-binding protein | SAMN05216241_103156 | Not Available | Positive | 1357238 - 1358230 | 35946.7 |
| coenzyme f420 hydrogenase subunit beta | SAMN05216241_103157 | Not Available | Negative | 1358312 - 1359580 | 44801.5 |
| gamma-butyrobetaine dioxygenase | SAMN05216241_103158 | Not Available | Negative | 1359604 - 1360725 | 42306.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05216241_103159 | Not Available | Positive | 1360822 - 1361739 | 33097.6 |
| predicted fe-s protein ydhl, duf1289 family | SAMN05216241_103160 | Not Available | Negative | 1361752 - 1361952 | 7218.33 |
| carbamate kinase | SAMN05216241_103161 | Not Available | Negative | 1362055 - 1362963 | 32562.2 |
| ornithine carbamoyltransferase | SAMN05216241_103162 | Not Available | Negative | 1362984 - 1363985 | 36552.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
