Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Rhodovibrionaceae
Genus
Limimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Rhodovibrionaceae |
| Genus | Limimonas |
| Species | Limimonas halophila |
| Strain | strain DSM 25584 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | The saline mud of the hypersaline lake |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
463676 bp
Thymine Count
463813 bp
Guanine Count
1062909 bp
Cytosine Count
1048718 bp
Genome Length
3039361 bp
Protein-coding Genes
2827 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN05216241_103129 | Not Available | Positive | 1331344 - 1332510 | 41930.9 |
| histidyl-trna synthetase | SAMN05216241_103130 | Not Available | Positive | 1332827 - 1334080 | 45755.5 |
| bacterial peptide chain release factor 1 (brf-1) | SAMN05216241_103131 | Not Available | Positive | 1334188 - 1335264 | 40025.9 |
| release factor glutamine methyltransferase | SAMN05216241_103132 | Not Available | Positive | 1335275 - 1336129 | 28876.6 |
| protein of unknown function | SAMN05216241_103133 | Not Available | Positive | 1336357 - 1336995 | 23031.3 |
| hypothetical protein | SAMN05216241_103134 | Not Available | Negative | 1337335 - 1338108 | 27988.5 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05216241_103135 | Not Available | Positive | 1338380 - 1341001 | 97236.8 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05216241_103136 | Not Available | Negative | 1341089 - 1342198 | 40861.4 |
| hypothetical protein | SAMN05216241_103137 | Not Available | Negative | 1342607 - 1343344 | 26612.8 |
| Trna-ile | Not Available | Not Available | Positive | 1345242 - 1345317 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
