Idiomarina zobellii strain KMM 231

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina zobellii strain KMM 231 is a notable marine bacterium characterized by the presence of flagella, enabling motility in its aquatic environment. This strain possesses a single replicon, indicating a streamlined genomic structure that could contribute to its adaptability and efficiency in marine ecosystems. The genomic data for Idiomarina zobellii strain KMM 231 can be found under the accession number FNCB00000000.1, which provides a basis for further genetic studies and insights into its metabolic pathways and ecological roles. The flagella not only facilitate movement but may also play a significant role in the bacterium's ability to colonize surfaces and interact with other microorganisms in marine habitats. The presence of a single replicon suggests a potential evolutionary advantage in maintaining genomic stability and reducing the energy costs associated with replication. This characteristic may allow Idiomarina zobellii strain KMM 231 to thrive in specific niches within the marine environment, where resource availability and competition are critical factors. Overall, the combination of flagella presence and the singular genomic replicon highlights the adaptive strategies employed by Idiomarina zobellii strain KMM 231, contributing to its ecological role in marine microbiomes. Understanding these traits can enhance our comprehension of microbial dynamics in oceanic systems and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina zobellii
Strainstrain KMM 231

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina zobellii strain KMM 231 genome assembly, contig:

Gene Summary

Adenine Count

685432 bp

Thymine Count

680817 bp

Guanine Count

596950 bp

Cytosine Count

618763 bp

Genome Length

2582063 bp

Protein-coding Genes

2510 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aconitase /2-methylcitrate dehydratase (trans-methylaconitate-forming)SAMN04515658_10149Not AvailableNegative56745 - 5934295452.5
citrate synthase /2-methylcitrate synthaseSAMN04515658_10150Not AvailableNegative59344 - 6046841967.9
methylisocitrate lyaseSAMN04515658_10151Not AvailableNegative60491 - 6136931838.7
dna-binding transcriptional regulator, gntr familySAMN04515658_10152Not AvailableNegative61366 - 6206426305.5
diguanylate cyclase (ggdef) domain-containing proteinSAMN04515658_10153Not AvailablePositive62236 - 6440180921.2
proton-dependent oligopeptide transporter, pot familySAMN04515658_10154Not AvailablePositive64535 - 6608856338.4
acyl-coenzyme a thioesterase paai, contains hgg motifSAMN04515658_10155Not AvailableNegative66151 - 6662117347.3
isocitrate dehydrogenaseSAMN04515658_10156Not AvailableNegative66711 - 6893682092.3
lactoylglutathione lyaseSAMN04515658_10157Not AvailableNegative69011 - 6945117108.3
hypothetical proteinSAMN04515658_10158Not AvailablePositive69537 - 697588384.69

Displaying genes 51 – 60 of 2563 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.