Idiomarina zobellii strain KMM 231

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina zobellii strain KMM 231 is a notable marine bacterium characterized by the presence of flagella, enabling motility in its aquatic environment. This strain possesses a single replicon, indicating a streamlined genomic structure that could contribute to its adaptability and efficiency in marine ecosystems. The genomic data for Idiomarina zobellii strain KMM 231 can be found under the accession number FNCB00000000.1, which provides a basis for further genetic studies and insights into its metabolic pathways and ecological roles. The flagella not only facilitate movement but may also play a significant role in the bacterium's ability to colonize surfaces and interact with other microorganisms in marine habitats. The presence of a single replicon suggests a potential evolutionary advantage in maintaining genomic stability and reducing the energy costs associated with replication. This characteristic may allow Idiomarina zobellii strain KMM 231 to thrive in specific niches within the marine environment, where resource availability and competition are critical factors. Overall, the combination of flagella presence and the singular genomic replicon highlights the adaptive strategies employed by Idiomarina zobellii strain KMM 231, contributing to its ecological role in marine microbiomes. Understanding these traits can enhance our comprehension of microbial dynamics in oceanic systems and their responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina zobellii
Strainstrain KMM 231

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina zobellii strain KMM 231 genome assembly, contig:

Gene Summary

Adenine Count

685432 bp

Thymine Count

680817 bp

Guanine Count

596950 bp

Cytosine Count

618763 bp

Genome Length

2582063 bp

Protein-coding Genes

2510 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-ketoacyl-coa thiolaseSAMN04515658_11135Not AvailableNegative1905375 - 190653841244.9
short chain enoyl-coa hydratase /3-hydroxyacyl-coa dehydrogenaseSAMN04515658_11136Not AvailableNegative1906559 - 190871577354.4
soluble lytic murein transglycosylaseSAMN04515658_11137Not AvailablePositive1908803 - 191081278190.0
xaa-pro dipeptidase metallo peptidase. merops family m24bSAMN04515658_11138Not AvailablePositive1910822 - 191217151183.9
uncharacterized protein, yigz familySAMN04515658_11139Not AvailablePositive1912173 - 191279922876.8
trk system potassium uptake protein trkaSAMN04515658_11140Not AvailableNegative1912796 - 191417250617.9
16s rrna m(5)c-967 methyltransferaseSAMN04515658_11141Not AvailableNegative1914169 - 191549749128.5
methionyl-trna formyltransferaseSAMN04515658_11142Not AvailableNegative1915494 - 191644133942.6
peptide deformylaseSAMN04515658_11143Not AvailableNegative1916441 - 191696519773.7
dna protecting protein dpraSAMN04515658_11144Not AvailablePositive1917029 - 191806637462.9

Displaying genes 1911 – 1920 of 2563 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.