Pseudomonas seleniipraecipitans strain LMG 25475

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Phytopseudomonas

Description

Pseudomonas seleniipraecipitans strain LMG 25475 is a rod-shaped bacterium characterized by a single replicon. This trait indicates a streamlined genomic structure, which can influence its adaptability and metabolic capabilities. The strain has been cataloged with the accession number FNBM00000000.1, providing a reference for further genomic studies and analyses. The rod shape of Pseudomonas seleniipraecipitans may contribute to its ecological role, as this morphology is often associated with motility and the ability to colonize various environments. Members of the Pseudomonas genus are known for their metabolic versatility, enabling them to thrive in diverse habitats, including soil, water, and as plant-associated organisms. This bacterium may play a role in biogeochemical cycles, particularly in selenium transformations, given its name, which suggests an association with selenium precipitation processes. Understanding the characteristics of Pseudomonas seleniipraecipitans strain LMG 25475 can provide insights into its potential applications in bioremediation and environmental management, particularly in contexts where selenium contamination is an issue. Its single replicon structure may also indicate a stable genetic configuration, which could be advantageous for studies focused on its ecological interactions and contributions to nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPhytopseudomonas
SpeciesPhytopseudomonas seleniipraecipitans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas seleniipraecipitans strain LMG 25475 genome assembly,

Gene Summary

Adenine Count

879750 bp

Thymine Count

869635 bp

Guanine Count

1389624 bp

Cytosine Count

1406502 bp

Genome Length

4546163 bp

Protein-coding Genes

4164 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted thiol-disulfide oxidoreductase yuxk, dcc familySAMN05216381_3614Not AvailableNegative3820672 - 382113017274.4
5-methylcytosine-specific restriction enzyme bSAMN05216381_3616Not AvailablePositive3822400 - 382389955812.3
5-methylcytosine-specific restriction endonuclease mcrbc, regulatory subunit mcrcSAMN05216381_3617Not AvailablePositive3823845 - 382517950493.9
t/g mismatch-specific endonucleaseSAMN05216381_3618Not AvailableNegative3825184 - 382578322806.4
dna-methyltransferase (dcm)SAMN05216381_3619Not AvailableNegative3825746 - 382829593527.8
hypothetical proteinSAMN05216381_3620Not AvailablePositive3828805 - 382912211487.7
Trna-proNot AvailableNot AvailablePositive3829258 - 3829334Not Available
transcriptional regulator, merr familySAMN05216381_3622Not AvailableNegative3829424 - 382978013969.0
integration host factor subunit alphaSAMN05216381_3623Not AvailableNegative3829761 - 383006311451.8
phenylalanyl-trna synthetase beta subunitSAMN05216381_3624Not AvailableNegative3830067 - 383244586911.3

Displaying genes 3571 – 3580 of 4256 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.