Pseudomonas seleniipraecipitans strain LMG 25475

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Phytopseudomonas

Description

Pseudomonas seleniipraecipitans strain LMG 25475 is a rod-shaped bacterium characterized by a single replicon. This trait indicates a streamlined genomic structure, which can influence its adaptability and metabolic capabilities. The strain has been cataloged with the accession number FNBM00000000.1, providing a reference for further genomic studies and analyses. The rod shape of Pseudomonas seleniipraecipitans may contribute to its ecological role, as this morphology is often associated with motility and the ability to colonize various environments. Members of the Pseudomonas genus are known for their metabolic versatility, enabling them to thrive in diverse habitats, including soil, water, and as plant-associated organisms. This bacterium may play a role in biogeochemical cycles, particularly in selenium transformations, given its name, which suggests an association with selenium precipitation processes. Understanding the characteristics of Pseudomonas seleniipraecipitans strain LMG 25475 can provide insights into its potential applications in bioremediation and environmental management, particularly in contexts where selenium contamination is an issue. Its single replicon structure may also indicate a stable genetic configuration, which could be advantageous for studies focused on its ecological interactions and contributions to nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPhytopseudomonas
SpeciesPhytopseudomonas seleniipraecipitans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas seleniipraecipitans strain LMG 25475 genome assembly,

Gene Summary

Adenine Count

879750 bp

Thymine Count

869635 bp

Guanine Count

1389624 bp

Cytosine Count

1406502 bp

Genome Length

4546163 bp

Protein-coding Genes

4164 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c4-dicarboxylate-binding protein dctpSAMN05216381_3493Not AvailablePositive3697989 - 369898436829.3
c4-dicarboxylate transporter, dctq subunitSAMN05216381_3494Not AvailablePositive3699130 - 369976823689.3
c4-dicarboxylate transporter, dctm subunitSAMN05216381_3495Not AvailablePositive3699765 - 370072033593.7
c4-dicarboxylate transporter, dctq subunitSAMN05216381_3496Not AvailableNegative3700721 - 37008635459.71
catechol 2,3-dioxygenaseSAMN05216381_3497Not AvailableNegative3701279 - 370165613890.8
c4-dicarboxylate-binding protein dctpSAMN05216381_3498Not AvailableNegative3701682 - 370268637314.9
dna-binding transcriptional regulator, lysr familySAMN05216381_3499Not AvailableNegative3702777 - 370369433886.0
crotonobetainyl-coa:carnitine coa-transferase caibSAMN05216381_3500Not AvailablePositive3703873 - 370507843317.1
hydroxymethylglutaryl-coa lyaseSAMN05216381_3501Not AvailablePositive3705313 - 370624833420.1
mfs transporter, dha2 family, multidrug resistance proteinSAMN05216381_3502Not AvailableNegative3706464 - 370799355439.6

Displaying genes 3451 – 3460 of 4256 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.