Pseudomonas seleniipraecipitans strain LMG 25475

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Phytopseudomonas

Description

Pseudomonas seleniipraecipitans strain LMG 25475 is a rod-shaped bacterium characterized by a single replicon. This trait indicates a streamlined genomic structure, which can influence its adaptability and metabolic capabilities. The strain has been cataloged with the accession number FNBM00000000.1, providing a reference for further genomic studies and analyses. The rod shape of Pseudomonas seleniipraecipitans may contribute to its ecological role, as this morphology is often associated with motility and the ability to colonize various environments. Members of the Pseudomonas genus are known for their metabolic versatility, enabling them to thrive in diverse habitats, including soil, water, and as plant-associated organisms. This bacterium may play a role in biogeochemical cycles, particularly in selenium transformations, given its name, which suggests an association with selenium precipitation processes. Understanding the characteristics of Pseudomonas seleniipraecipitans strain LMG 25475 can provide insights into its potential applications in bioremediation and environmental management, particularly in contexts where selenium contamination is an issue. Its single replicon structure may also indicate a stable genetic configuration, which could be advantageous for studies focused on its ecological interactions and contributions to nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPhytopseudomonas
SpeciesPhytopseudomonas seleniipraecipitans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas seleniipraecipitans strain LMG 25475 genome assembly,

Gene Summary

Adenine Count

879750 bp

Thymine Count

869635 bp

Guanine Count

1389624 bp

Cytosine Count

1406502 bp

Genome Length

4546163 bp

Protein-coding Genes

4164 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyltransferase domain-containing proteinSAMN05216381_0241Not AvailableNegative246372 - 24716328597.9
exodeoxyribonuclease i subunit dSAMN05216381_0242Not AvailablePositive247398 - 24861243968.5
methyl-accepting chemotaxis sensory transducer with cache sensorSAMN05216381_0243Not AvailableNegative248672 - 25030658390.6
transcriptional regulator, gntr familySAMN05216381_0244Not AvailableNegative250600 - 25133727300.9
predicted metal-dependent hydrolase, tim-barrel foldSAMN05216381_0245Not AvailablePositive251512 - 25234230706.8
transporter, uit1 familySAMN05216381_0246Not AvailablePositive252375 - 25367645669.8
glucose/arabinose dehydrogenase, beta-propeller foldSAMN05216381_0247Not AvailableNegative253793 - 25492040163.1
hypothetical proteinSAMN05216381_0248Not AvailableNegative255265 - 25575317905.5
transcriptional regulator, lysr familySAMN05216381_0249Not AvailableNegative256065 - 25695832921.3
mfs transporter, dha1 family, purine ribonucleoside efflux pumpSAMN05216381_0250Not AvailablePositive257192 - 25831638951.0

Displaying genes 301 – 310 of 4256 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.