Pseudomonas seleniipraecipitans strain LMG 25475

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Phytopseudomonas

Description

Pseudomonas seleniipraecipitans strain LMG 25475 is a rod-shaped bacterium characterized by a single replicon. This trait indicates a streamlined genomic structure, which can influence its adaptability and metabolic capabilities. The strain has been cataloged with the accession number FNBM00000000.1, providing a reference for further genomic studies and analyses. The rod shape of Pseudomonas seleniipraecipitans may contribute to its ecological role, as this morphology is often associated with motility and the ability to colonize various environments. Members of the Pseudomonas genus are known for their metabolic versatility, enabling them to thrive in diverse habitats, including soil, water, and as plant-associated organisms. This bacterium may play a role in biogeochemical cycles, particularly in selenium transformations, given its name, which suggests an association with selenium precipitation processes. Understanding the characteristics of Pseudomonas seleniipraecipitans strain LMG 25475 can provide insights into its potential applications in bioremediation and environmental management, particularly in contexts where selenium contamination is an issue. Its single replicon structure may also indicate a stable genetic configuration, which could be advantageous for studies focused on its ecological interactions and contributions to nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPhytopseudomonas
SpeciesPhytopseudomonas seleniipraecipitans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas seleniipraecipitans strain LMG 25475 genome assembly,

Gene Summary

Adenine Count

879750 bp

Thymine Count

869635 bp

Guanine Count

1389624 bp

Cytosine Count

1406502 bp

Genome Length

4546163 bp

Protein-coding Genes

4164 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
taurine dioxygenaseSAMN05216381_3030Not AvailableNegative3218678 - 321957133662.0
d-methionine transport system substrate-binding proteinSAMN05216381_3031Not AvailableNegative3219836 - 322061528306.0
d-cysteine desulfhydraseSAMN05216381_3032Not AvailablePositive3220837 - 322183535719.1
l-cystine-binding protein /diaminopimelate-binding proteinSAMN05216381_3033Not AvailablePositive3221922 - 322271928966.5
l-cystine abc transporter membrane protein /diaminopimelate abc transporter membrane proteinSAMN05216381_3034Not AvailablePositive3222716 - 322338424506.6
l-cystine abc transporter atp-binding protein /diaminopimelate abc transporter atp-binding proteinSAMN05216381_3035Not AvailablePositive3223384 - 322417228342.5
uncharacterized membrane protein yeihSAMN05216381_3036Not AvailableNegative3224200 - 322482322508.3
nadph-glutathione reductaseSAMN05216381_3037Not AvailableNegative3224831 - 322618649289.0
catechol 2,3-dioxygenaseSAMN05216381_3038Not AvailablePositive3226306 - 322674316007.3
integrase core domain-containing proteinSAMN05216381_3039Not AvailableNegative3226760 - 322705911349.5

Displaying genes 3001 – 3010 of 4256 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.