Pseudomonas seleniipraecipitans strain LMG 25475

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Phytopseudomonas

Description

Pseudomonas seleniipraecipitans strain LMG 25475 is a rod-shaped bacterium characterized by a single replicon. This trait indicates a streamlined genomic structure, which can influence its adaptability and metabolic capabilities. The strain has been cataloged with the accession number FNBM00000000.1, providing a reference for further genomic studies and analyses. The rod shape of Pseudomonas seleniipraecipitans may contribute to its ecological role, as this morphology is often associated with motility and the ability to colonize various environments. Members of the Pseudomonas genus are known for their metabolic versatility, enabling them to thrive in diverse habitats, including soil, water, and as plant-associated organisms. This bacterium may play a role in biogeochemical cycles, particularly in selenium transformations, given its name, which suggests an association with selenium precipitation processes. Understanding the characteristics of Pseudomonas seleniipraecipitans strain LMG 25475 can provide insights into its potential applications in bioremediation and environmental management, particularly in contexts where selenium contamination is an issue. Its single replicon structure may also indicate a stable genetic configuration, which could be advantageous for studies focused on its ecological interactions and contributions to nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPhytopseudomonas
SpeciesPhytopseudomonas seleniipraecipitans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas seleniipraecipitans strain LMG 25475 genome assembly,

Gene Summary

Adenine Count

879750 bp

Thymine Count

869635 bp

Guanine Count

1389624 bp

Cytosine Count

1406502 bp

Genome Length

4546163 bp

Protein-coding Genes

4164 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
drug resistance transporter, emrb/qaca subfamilySAMN05216381_2690Not AvailableNegative2835885 - 283730050595.4
monosaccharide abc transporter substrate-binding protein, cut2 familySAMN05216381_2691Not AvailablePositive2837506 - 283852236815.4
choline dehydrogenaseSAMN05216381_2692Not AvailableNegative2838519 - 284022862442.7
betaine aldehyde dehydrogenaseSAMN05216381_2693Not AvailableNegative2840349 - 284182153639.8
transcriptional regulator, tetr familySAMN05216381_2694Not AvailableNegative2842167 - 284276922257.8
two-component system, ompr family, kdp operon response regulator kdpeSAMN05216381_2695Not AvailableNegative2842829 - 284352125558.0
osmosensitive k+ channel signal transduction histidine kinaseSAMN05216381_2696Not AvailableNegative2843518 - 284547370486.6
kup system potassium uptake proteinSAMN05216381_2697Not AvailablePositive2845605 - 284748267967.9
methyltransferase domain-containing proteinSAMN05216381_2698Not AvailableNegative2847628 - 284826023623.7
dna damage-inducible dna polymerase iiSAMN05216381_2699Not AvailablePositive2848376 - 285073389425.8

Displaying genes 2661 – 2670 of 4256 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.