Pseudomonas seleniipraecipitans strain LMG 25475

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Phytopseudomonas

Description

Pseudomonas seleniipraecipitans strain LMG 25475 is a rod-shaped bacterium characterized by a single replicon. This trait indicates a streamlined genomic structure, which can influence its adaptability and metabolic capabilities. The strain has been cataloged with the accession number FNBM00000000.1, providing a reference for further genomic studies and analyses. The rod shape of Pseudomonas seleniipraecipitans may contribute to its ecological role, as this morphology is often associated with motility and the ability to colonize various environments. Members of the Pseudomonas genus are known for their metabolic versatility, enabling them to thrive in diverse habitats, including soil, water, and as plant-associated organisms. This bacterium may play a role in biogeochemical cycles, particularly in selenium transformations, given its name, which suggests an association with selenium precipitation processes. Understanding the characteristics of Pseudomonas seleniipraecipitans strain LMG 25475 can provide insights into its potential applications in bioremediation and environmental management, particularly in contexts where selenium contamination is an issue. Its single replicon structure may also indicate a stable genetic configuration, which could be advantageous for studies focused on its ecological interactions and contributions to nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPhytopseudomonas
SpeciesPhytopseudomonas seleniipraecipitans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas seleniipraecipitans strain LMG 25475 genome assembly,

Gene Summary

Adenine Count

879750 bp

Thymine Count

869635 bp

Guanine Count

1389624 bp

Cytosine Count

1406502 bp

Genome Length

4546163 bp

Protein-coding Genes

4164 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap-type mannitol/chloroaromatic compound transport system, substrate-binding proteinSAMN05216381_2498Not AvailableNegative2623104 - 262421339933.8
dna-binding transcriptional regulator, lrp familySAMN05216381_2499Not AvailableNegative2624602 - 262504816552.2
ribosomal protein s18 acetylase rimiSAMN05216381_2500Not AvailableNegative2625107 - 262556217518.9
amino acid abc transporter membrane protein, paat familySAMN05216381_2501Not AvailableNegative2625644 - 262647730318.8
amino acid abc transporter substrate-binding protein, paat familySAMN05216381_2502Not AvailableNegative2626474 - 262729529786.4
homocysteine s-methyltransferaseSAMN05216381_2503Not AvailablePositive2627380 - 262830633218.3
l-glutaminaseSAMN05216381_2504Not AvailablePositive2628403 - 262931132632.1
hypothetical proteinSAMN05216381_2505Not AvailableNegative2629414 - 262981214982.3
l-asparaginaseSAMN05216381_2506Not AvailableNegative2629905 - 263089134782.0
alanine or glycine:cation symporter, agcs familySAMN05216381_2507Not AvailableNegative2631013 - 263244050953.4

Displaying genes 2471 – 2480 of 4256 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.