Dyadobacter soli strain DSM 25329

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Dyadobacter

Description

Dyadobacter soli strain DSM 25329 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain possesses flagella, which are typically associated with motility; however, in this case, the organism does not exhibit movement. Dyadobacter soli is classified as mesophilic, with an optimal growth temperature of 25°C, indicating it thrives in moderate temperature conditions. The strain has a single replicon, which is relevant for understanding its genetic structure and replication mechanisms. The accession number for Dyadobacter soli strain DSM 25329 is FNAN00000000.1, providing a reference point for further genetic and taxonomic studies. Ecologically, Dyadobacter soli may play a role in soil environments, contributing to nutrient cycling and organic matter decomposition due to its aerobic nature. Its ability to thrive at moderate temperatures suggests it may be well-suited for environments that experience seasonal temperature variations. Understanding its traits can provide insights into its ecological functions and interactions within microbial communities in soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusDyadobacter
SpeciesDyadobacter soli
Strainstrain DSM 25329

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Dyadobacter soli strain DSM 25329
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatsoil ecosystems
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyadobacter soli strain DSM 25329 genome assembly, contig:

Gene Summary

Adenine Count

2165010 bp

Thymine Count

2166022 bp

Guanine Count

2216195 bp

Cytosine Count

2197037 bp

Genome Length

8744781 bp

Protein-coding Genes

7296 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized conserved protein, duf2126 familySAMN04487996_106284Not AvailablePositive2815159 - 2818575129354.0
uncharacterized conserved protein, circularly permuted atpgrasp superfamilySAMN04487996_106285Not AvailablePositive2818603 - 282115595551.7
transglutaminase-like enzyme, putative cysteine proteaseSAMN04487996_106286Not AvailablePositive2821145 - 282202032912.3
hypothetical proteinSAMN04487996_106287Not AvailableNegative2822051 - 28221794850.88
pyruvate dehydrogenase e1 component beta subunitSAMN04487996_106288Not AvailablePositive2822229 - 282320935895.5
transcriptional regulator, trar/dksa familySAMN04487996_106289Not AvailablePositive2823403 - 282378614338.0
exodeoxyribonuclease i subunit dSAMN04487996_106290Not AvailableNegative2823984 - 282521346036.0
polysaccharide deacetylaseSAMN04487996_106291Not AvailablePositive2825241 - 282606830869.9
peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domainsSAMN04487996_106292Not AvailableNegative2826069 - 282719343349.9
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)SAMN04487996_106293Not AvailableNegative2827199 - 282772019272.3

Displaying genes 2401 – 2410 of 7350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.