Dyadobacter soli strain DSM 25329

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Dyadobacter

Description

Dyadobacter soli strain DSM 25329 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain possesses flagella, which are typically associated with motility; however, in this case, the organism does not exhibit movement. Dyadobacter soli is classified as mesophilic, with an optimal growth temperature of 25°C, indicating it thrives in moderate temperature conditions. The strain has a single replicon, which is relevant for understanding its genetic structure and replication mechanisms. The accession number for Dyadobacter soli strain DSM 25329 is FNAN00000000.1, providing a reference point for further genetic and taxonomic studies. Ecologically, Dyadobacter soli may play a role in soil environments, contributing to nutrient cycling and organic matter decomposition due to its aerobic nature. Its ability to thrive at moderate temperatures suggests it may be well-suited for environments that experience seasonal temperature variations. Understanding its traits can provide insights into its ecological functions and interactions within microbial communities in soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusDyadobacter
SpeciesDyadobacter soli
Strainstrain DSM 25329

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Dyadobacter soli strain DSM 25329
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatsoil ecosystems
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyadobacter soli strain DSM 25329 genome assembly, contig:

Gene Summary

Adenine Count

2165010 bp

Thymine Count

2166022 bp

Guanine Count

2216195 bp

Cytosine Count

2197037 bp

Genome Length

8744781 bp

Protein-coding Genes

7296 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
small subunit ribosomal protein s16SAMN04487996_103117Not AvailablePositive1236639 - 123722320793.4
16s rrna processing protein rimmSAMN04487996_103118Not AvailablePositive1237314 - 123787420810.4
trna (guanine37-n1)-methyltransferaseSAMN04487996_103119Not AvailablePositive1237861 - 123853825438.7
n-acetylglutamate synthase, gnat familySAMN04487996_103120Not AvailableNegative1238582 - 123902517111.5
ribosomal large subunit pseudouridine synthase dSAMN04487996_103121Not AvailableNegative1239077 - 124010838620.5
1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase, plp-dependent acc familySAMN04487996_103122Not AvailablePositive1240147 - 124104332755.4
monovalent cation:h+ antiporter-2, cpa2 familySAMN04487996_103123Not AvailableNegative1241033 - 124330684404.8
fe-s cluster assembly protein sufbSAMN04487996_103124Not AvailableNegative1243406 - 124485153755.7
adp-l-glycero-d-manno-heptose 6-epimeraseSAMN04487996_103125Not AvailableNegative1245034 - 124599936912.6
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthaseSAMN04487996_103126Not AvailablePositive1246177 - 124659615973.1

Displaying genes 1031 – 1040 of 7350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.