Psychrobacter pacificensis strain DSM 23406

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter pacificensis strain DSM 23406 is a psychrophilic bacterium, notable for its ability to thrive in cold environments. A defining feature of this strain is the presence of flagella, which facilitates motility, a crucial aspect for survival in its natural habitats. This strain possesses a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in nutrient acquisition. The accession number associated with this strain is FNAL00000000.1, which provides a reference for genomic data and facilitates further research into its characteristics. The psychrophilic nature of Psychrobacter pacificensis suggests its ecological role in cold marine environments, where it may contribute to biogeochemical cycles, including the degradation of organic matter. By understanding the traits of this strain, scientists can gain insights into microbial life in extreme conditions, which may have implications for biotechnology and understandings of microbial adaptations to climate change.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter pacificensis
Strainstrain DSM 23406

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmarine-biofouling material
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter pacificensis strain DSM 23406 genome assembly,

Gene Summary

Adenine Count

858285 bp

Thymine Count

856280 bp

Guanine Count

686972 bp

Cytosine Count

659353 bp

Genome Length

3062581 bp

Protein-coding Genes

2622 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted metalloprotease, contains c-terminal pdz domainSAMN05660405_00157Not AvailablePositive182402 - 18441476199.5
uncharacterized conserved protein, duf305 familySAMN05660405_00158Not AvailableNegative184741 - 18559231025.5
23s rrna pseudouridine2457 synthaseSAMN05660405_00159Not AvailableNegative185880 - 18649422947.7
isocitrate dehydrogenase (nadp)SAMN05660405_00160Not AvailablePositive187112 - 18837145700.2
isocitrate dehydrogenaseSAMN05660405_00161Not AvailableNegative188631 - 19085083035.1
hypothetical proteinSAMN05660405_00162Not AvailablePositive191472 - 19282150647.7
chorismate lyaseSAMN05660405_00163Not AvailablePositive192898 - 19340119110.1
serine hydroxymethyltransferaseSAMN05660405_00164Not AvailablePositive193850 - 19510645352.9
hypothetical proteinSAMN05660405_00165Not AvailablePositive195200 - 19565817345.5
zinc transporter, zip familySAMN05660405_00166Not AvailableNegative195834 - 19653223510.3

Displaying genes 211 – 220 of 2711 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.