Paracoccus isoporae strain DSM 22220

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus isoporae strain DSM 22220 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, indicating its motility. This strain is aerobic, requiring oxygen for its growth and metabolic processes. It thrives at an optimal temperature of 29°C, placing it within the mesophilic temperature range, which is typically between 20°C and 45°C. In terms of genomic features, Paracoccus isoporae has a single replicon, which is an essential trait for understanding its genetic organization and replication mechanisms. The strain is cataloged under the accession number FNAH00000000.1, providing a reference for its genetic material and facilitating further research. The ecological significance of Paracoccus isoporae may be linked to its aerobic metabolism, allowing it to play a role in nutrient cycling within its environment. As a member of the Paracoccus genus, it may contribute to processes such as nitrogen fixation or the degradation of organic compounds, supporting ecosystem health and function. The strain's adaptability to a mesophilic range suggests it may be found in various terrestrial and aquatic environments that maintain moderate temperatures, further enhancing its potential ecological roles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus isoporae
Strainstrain DSM 22220

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Paracoccus isoporae strain DSM 22220
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus isoporae strain DSM 22220 genome assembly, contig:

Gene Summary

Adenine Count

604007 bp

Thymine Count

600648 bp

Guanine Count

1157112 bp

Cytosine Count

1161706 bp

Genome Length

3523473 bp

Protein-coding Genes

3334 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN05421538_11613Not AvailableNegative3380162 - 338087524912.1
dna-binding transcriptional regulator, fadr familySAMN05421538_11614Not AvailableNegative3381071 - 338185328355.0
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN05421538_11615Not AvailableNegative3381907 - 338225412830.4
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05421538_11616Not AvailableNegative3382258 - 338305527277.6
shikimate dehydrogenaseSAMN05421538_11617Not AvailableNegative3383048 - 338386028454.1
2-hydroxy-3-oxopropionate reductaseSAMN05421538_11618Not AvailableNegative3383860 - 338474730295.7
4-hydroxy-2-oxoheptanedioate aldolaseSAMN05421538_11619Not AvailablePositive3384846 - 338562527421.7
glycine/d-amino acid oxidaseSAMN05421538_11620Not AvailablePositive3385625 - 338684244707.9
lysr family transcriptional regulator, glycine cleavage system transcriptional activatorSAMN05421538_11621Not AvailablePositive3387045 - 338802236158.2
trap-type c4-dicarboxylate transport system, substrate-binding proteinSAMN05421538_11622Not AvailablePositive3388262 - 338928137698.9

Displaying genes 3271 – 3280 of 3403 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.