Peptococcus niger strain DSM 20475

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Peptococcaceae

Genus

Peptococcus

Description

Peptococcus niger strain DSM 20475 is an anaerobic bacterium that exhibits a unique metabolic profile, thriving in environments devoid of oxygen. This strain is characterized by having a single replicon, which indicates a streamlined genetic structure that may contribute to its efficient anaerobic metabolism. The strain is cataloged with the accession number FNAF00000000.1, which allows for its identification and further study within microbial databases. Its classification as a member of the Peptococcus genus suggests that it may play a role in various ecological niches, particularly those involving organic matter decomposition. The anaerobic nature of Peptococcus niger highlights its potential significance in biogeochemical cycles, particularly in anaerobic digestion processes where microorganisms break down organic materials in the absence of oxygen. This capacity can be particularly beneficial in waste treatment systems, where the breakdown of organic pollutants is essential for maintaining environmental health. Understanding the characteristics of Peptococcus niger DSM 20475 can provide insights into the functional roles of anaerobic bacteria in various ecosystems, emphasizing their importance in nutrient cycling and organic matter degradation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyPeptococcaceae
GenusPeptococcus
SpeciesPeptococcus niger
Strainstrain DSM 20475

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Peptococcus niger strain DSM 20475 genome assembly, contig:

Gene Summary

Adenine Count

501020 bp

Thymine Count

490588 bp

Guanine Count

491875 bp

Cytosine Count

482209 bp

Genome Length

1968473 bp

Protein-coding Genes

1818 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate transport system substrate-binding proteinSAMN04489866_103155Not AvailablePositive773735 - 77469433527.6
phosphate transport system permease proteinSAMN04489866_103156Not AvailablePositive774723 - 77561631934.9
phosphate transport system permease proteinSAMN04489866_103157Not AvailablePositive775626 - 77650431534.8
phosphate abc transporter atp-binding protein, phot familySAMN04489866_103158Not AvailablePositive776517 - 77740432365.8
phosphate transport system proteinSAMN04489866_103159Not AvailablePositive777415 - 77805924170.0
two-component system, ompr family, alkaline phosphatase synthesis response regulator phopSAMN04489866_103160Not AvailablePositive778075 - 77876725591.9
two-component system, ompr family, phosphate regulon sensor histidine kinase phorSAMN04489866_103161Not AvailablePositive778764 - 78047963323.8
hypothetical proteinSAMN04489866_103162Not AvailablePositive780862 - 78203443316.8
copper amine oxidase n-terminal domain-containing proteinSAMN04489866_103163Not AvailablePositive782068 - 78300333816.1
hypothetical proteinSAMN04489866_103164Not AvailablePositive783226 - 7834748840.39

Displaying genes 781 – 790 of 1917 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.