Peptococcus niger strain DSM 20475

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Peptococcaceae

Genus

Peptococcus

Description

Peptococcus niger strain DSM 20475 is an anaerobic bacterium that exhibits a unique metabolic profile, thriving in environments devoid of oxygen. This strain is characterized by having a single replicon, which indicates a streamlined genetic structure that may contribute to its efficient anaerobic metabolism. The strain is cataloged with the accession number FNAF00000000.1, which allows for its identification and further study within microbial databases. Its classification as a member of the Peptococcus genus suggests that it may play a role in various ecological niches, particularly those involving organic matter decomposition. The anaerobic nature of Peptococcus niger highlights its potential significance in biogeochemical cycles, particularly in anaerobic digestion processes where microorganisms break down organic materials in the absence of oxygen. This capacity can be particularly beneficial in waste treatment systems, where the breakdown of organic pollutants is essential for maintaining environmental health. Understanding the characteristics of Peptococcus niger DSM 20475 can provide insights into the functional roles of anaerobic bacteria in various ecosystems, emphasizing their importance in nutrient cycling and organic matter degradation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyPeptococcaceae
GenusPeptococcus
SpeciesPeptococcus niger
Strainstrain DSM 20475

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Peptococcus niger strain DSM 20475 genome assembly, contig:

Gene Summary

Adenine Count

501020 bp

Thymine Count

490588 bp

Guanine Count

491875 bp

Cytosine Count

482209 bp

Genome Length

1968473 bp

Protein-coding Genes

1818 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dgtpaseSAMN04489866_11231Not AvailablePositive1676052 - 167709539151.8
dna primaseSAMN04489866_11232Not AvailablePositive1677230 - 167904167665.6
rna polymerase primary sigma factorSAMN04489866_11233Not AvailablePositive1679045 - 168017843173.5
Trna-metNot AvailableNot AvailablePositive1680235 - 1680306Not Available
trna threonylcarbamoyladenosine biosynthesis protein tsaeSAMN04489866_11235Not AvailablePositive1680359 - 168079916021.1
trna threonylcarbamoyladenosine biosynthesis protein tsabSAMN04489866_11236Not AvailablePositive1680799 - 168151525306.8
[ssu ribosomal protein s18p]-alanine acetyltransferaseSAMN04489866_11237Not AvailablePositive1681508 - 168196917145.2
o-sialoglycoprotein endopeptidaseSAMN04489866_11238Not AvailablePositive1681944 - 168296636024.2
negative regulator of genetic competence, sporulation and motilitySAMN04489866_11239Not AvailablePositive1683054 - 168366823118.3
dna-(apurinic or apyrimidinic site) lyase /endonuclease iiiSAMN04489866_11240Not AvailablePositive1683729 - 168436423698.6

Displaying genes 1641 – 1650 of 1917 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.