Peptococcus niger strain DSM 20475

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Peptococcaceae

Genus

Peptococcus

Description

Peptococcus niger strain DSM 20475 is an anaerobic bacterium that exhibits a unique metabolic profile, thriving in environments devoid of oxygen. This strain is characterized by having a single replicon, which indicates a streamlined genetic structure that may contribute to its efficient anaerobic metabolism. The strain is cataloged with the accession number FNAF00000000.1, which allows for its identification and further study within microbial databases. Its classification as a member of the Peptococcus genus suggests that it may play a role in various ecological niches, particularly those involving organic matter decomposition. The anaerobic nature of Peptococcus niger highlights its potential significance in biogeochemical cycles, particularly in anaerobic digestion processes where microorganisms break down organic materials in the absence of oxygen. This capacity can be particularly beneficial in waste treatment systems, where the breakdown of organic pollutants is essential for maintaining environmental health. Understanding the characteristics of Peptococcus niger DSM 20475 can provide insights into the functional roles of anaerobic bacteria in various ecosystems, emphasizing their importance in nutrient cycling and organic matter degradation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyPeptococcaceae
GenusPeptococcus
SpeciesPeptococcus niger
Strainstrain DSM 20475

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Peptococcus niger strain DSM 20475 genome assembly, contig:

Gene Summary

Adenine Count

501020 bp

Thymine Count

490588 bp

Guanine Count

491875 bp

Cytosine Count

482209 bp

Genome Length

1968473 bp

Protein-coding Genes

1818 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyltransferase family proteinSAMN04489866_10973Not AvailablePositive1522792 - 152375736243.6
glycosyltransferase involved in cell wall bisynthesisSAMN04489866_10974Not AvailablePositive1523907 - 152504642508.8
two-component system, ompr family, response regulatorSAMN04489866_10975Not AvailablePositive1525078 - 152578526738.0
two-component system, ompr family, sensor histidine kinase baesSAMN04489866_10976Not AvailablePositive1525763 - 152714251249.2
putative adhesinSAMN04489866_10977Not AvailablePositive1527233 - 152821336883.5
pyruvate-ferredoxin/flavodoxin oxidoreductaseSAMN04489866_1101Not AvailableNegative1528857 - 1532441131228.0
dna polymerase-3 subunit alphaSAMN04489866_1102Not AvailableNegative1532602 - 1536288136042.0
prolyl-trna synthetaseSAMN04489866_1103Not AvailableNegative1536299 - 153800863115.4
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseSAMN04489866_1104Not AvailableNegative1538005 - 153907237379.4
regulator of sigma e proteaseSAMN04489866_1105Not AvailableNegative1539080 - 154015037943.7

Displaying genes 1491 – 1500 of 1917 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.