Peptococcus niger strain DSM 20475

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Peptococcaceae

Genus

Peptococcus

Description

Peptococcus niger strain DSM 20475 is an anaerobic bacterium that exhibits a unique metabolic profile, thriving in environments devoid of oxygen. This strain is characterized by having a single replicon, which indicates a streamlined genetic structure that may contribute to its efficient anaerobic metabolism. The strain is cataloged with the accession number FNAF00000000.1, which allows for its identification and further study within microbial databases. Its classification as a member of the Peptococcus genus suggests that it may play a role in various ecological niches, particularly those involving organic matter decomposition. The anaerobic nature of Peptococcus niger highlights its potential significance in biogeochemical cycles, particularly in anaerobic digestion processes where microorganisms break down organic materials in the absence of oxygen. This capacity can be particularly beneficial in waste treatment systems, where the breakdown of organic pollutants is essential for maintaining environmental health. Understanding the characteristics of Peptococcus niger DSM 20475 can provide insights into the functional roles of anaerobic bacteria in various ecosystems, emphasizing their importance in nutrient cycling and organic matter degradation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyPeptococcaceae
GenusPeptococcus
SpeciesPeptococcus niger
Strainstrain DSM 20475

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Peptococcus niger strain DSM 20475 genome assembly, contig:

Gene Summary

Adenine Count

501020 bp

Thymine Count

490588 bp

Guanine Count

491875 bp

Cytosine Count

482209 bp

Genome Length

1968473 bp

Protein-coding Genes

1818 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-aspNot AvailableNot AvailablePositive1206518 - 1206591Not Available
Trna-valNot AvailableNot AvailablePositive1206596 - 1206668Not Available
Trna-gluNot AvailableNot AvailablePositive1206675 - 1206748Not Available
nitrate reductase gamma subunitSAMN04489866_10627Not AvailableNegative1207030 - 120809440321.1
putative sulfite reductase-associated electron transfer protein dsrpSAMN04489866_10628Not AvailableNegative1208094 - 120940448436.1
putative sulfite reductase-associated electron transfer protein dsroSAMN04489866_10629Not AvailableNegative1209401 - 121019529062.1
hypothetical proteinSAMN04489866_10630Not AvailableNegative1210195 - 121063816339.3
fe-s oxidoreductaseSAMN04489866_10631Not AvailableNegative1210631 - 121225661467.3
rsbt co-antagonist protein rsbrd n-terminal domain-containing proteinSAMN04489866_10632Not AvailableNegative1212261 - 121288422924.4
cytochrome c-type biogenesis protein ccsbSAMN04489866_10633Not AvailableNegative1212903 - 121367628158.4

Displaying genes 1181 – 1190 of 1917 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.