Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria marina |
| Strain | strain CGMCC 1.9108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927639 bp
Thymine Count
931575 bp
Guanine Count
1568044 bp
Cytosine Count
1567964 bp
Genome Length
4995422 bp
Protein-coding Genes
4719 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | SAMN04488239_1353 | Not Available | Negative | 4878416 - 4879600 | 41987.0 |
| alkaline phosphatase d | SAMN04488239_1354 | Not Available | Negative | 4879627 - 4880724 | 40878.9 |
| hypothetical protein | SAMN04488239_1355 | Not Available | Negative | 4880825 - 4881592 | 27947.3 |
| imidazolonepropionase | SAMN04488239_1356 | Not Available | Negative | 4881680 - 4883116 | 52397.4 |
| arac-type dna-binding protein | SAMN04488239_1357 | Not Available | Positive | 4883270 - 4884277 | 37348.8 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04488239_1358 | Not Available | Negative | 4884804 - 4885838 | 38091.6 |
| methyltransferase domain-containing protein | SAMN04488239_1359 | Not Available | Positive | 4885965 - 4886774 | 28757.5 |
| hypothetical protein | SAMN04488239_13510 | Not Available | Negative | 4886887 - 4887042 | 5669.88 |
| tetratricopeptide repeat-containing protein | SAMN04488239_13511 | Not Available | Negative | 4887225 - 4890176 | 107228.0 |
| protein of unknown function | SAMN04488239_13512 | Not Available | Negative | 4890388 - 4890651 | 9613.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
