Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria marina |
| Strain | strain CGMCC 1.9108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927639 bp
Thymine Count
931575 bp
Guanine Count
1568044 bp
Cytosine Count
1567964 bp
Genome Length
4995422 bp
Protein-coding Genes
4719 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase beta subunit | SAMN04488239_12132 | Not Available | Positive | 4356525 - 4357121 | 21310.4 |
| formate dehydrogenase subunit gamma | SAMN04488239_12133 | Not Available | Positive | 4357255 - 4358478 | 44627.3 |
| cytochrome c | SAMN04488239_12134 | Not Available | Positive | 4358475 - 4359746 | 44990.1 |
| hypothetical protein | SAMN04488239_12135 | Not Available | Positive | 4359753 - 4359878 | 4306.44 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04488239_12136 | Not Available | Positive | 4359862 - 4361232 | 50151.6 |
| dna-binding transcriptional regulator, lysr family | SAMN04488239_12137 | Not Available | Negative | 4361422 - 4362366 | 33840.7 |
| putative oxidoreductase | SAMN04488239_12138 | Not Available | Positive | 4362447 - 4362869 | 14506.8 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN04488239_12139 | Not Available | Positive | 4362930 - 4363751 | 29878.8 |
| putative glutathione s-transferase | SAMN04488239_12140 | Not Available | Positive | 4363764 - 4364732 | 36715.9 |
| ppic-type ppiase domain-containing protein | SAMN04488239_12141 | Not Available | Positive | 4365064 - 4365894 | 30607.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
