Ruegeria marina strain CGMCC 1.9108

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria marina strain CGMCC 1.9108 is a Gram-negative, non-motile rod-shaped bacterium. This strain demonstrates mesophilic characteristics, with an optimal growth temperature of 37°C. The genetic structure of Ruegeria marina strain CGMCC 1.9108 is characterized by the presence of a single replicon, which is an important feature for its genomic stability and replication. Given its optimal temperature and mesophilic nature, Ruegeria marina strain CGMCC 1.9108 is likely well-adapted to moderate environmental conditions, potentially thriving in marine ecosystems where temperatures typically fluctuate around this range. The designation of Gram-negative indicates that this bacterium possesses a thinner peptidoglycan layer in its cell wall, which is characteristic of this group and may influence its interactions with other organisms and its environment. The accession number for this strain is FMZV00000000.1, which provides a reference for genomic studies and can facilitate comparative analysis with other strains or species within the Ruegeria genus. Biologically, the traits of Ruegeria marina strain CGMCC 1.9108 suggest it may play a role in marine nutrient cycling. Its mesophilic nature and adaptation to moderate temperatures might also indicate its potential involvement in ecological interactions within its habitat, such as breaking down organic materials or interacting with marine flora and fauna. Understanding the specific ecological roles of this strain could provide insights into microbial processes in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria marina
Strainstrain CGMCC 1.9108

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruegeria marina strain CGMCC 1.9108 genome assembly, contig:

Gene Summary

Adenine Count

927639 bp

Thymine Count

931575 bp

Guanine Count

1568044 bp

Cytosine Count

1567964 bp

Genome Length

4995422 bp

Protein-coding Genes

4719 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh dehydrogenase subunit lSAMN04488239_12041Not AvailablePositive4274092 - 427623677586.4
nadh dehydrogenase subunit mSAMN04488239_12042Not AvailablePositive4276236 - 427777755994.8
nadh dehydrogenase subunit nSAMN04488239_12043Not AvailablePositive4277793 - 427923550977.5
bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligaseSAMN04488239_12044Not AvailablePositive4279293 - 428004226237.2
pantothenate kinaseSAMN04488239_12045Not AvailablePositive4280055 - 428083428007.6
ribonuclease jSAMN04488239_12046Not AvailablePositive4280831 - 428249860144.0
8-oxo-dgtp pyrophosphatase mutt, nudix familySAMN04488239_12047Not AvailableNegative4282580 - 428328125391.3
uncharacterized conserved protein, duf983 familySAMN04488239_12048Not AvailableNegative4283304 - 428369614420.6
ef handSAMN04488239_12049Not AvailablePositive4283916 - 428438616795.6
hypothetical proteinSAMN04488239_12050Not AvailablePositive4284401 - 42845354342.98

Displaying genes 4171 – 4180 of 4786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.