Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria marina |
| Strain | strain CGMCC 1.9108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927639 bp
Thymine Count
931575 bp
Guanine Count
1568044 bp
Cytosine Count
1567964 bp
Genome Length
4995422 bp
Protein-coding Genes
4719 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488239_116114 | Not Available | Negative | 3892329 - 3893063 | 25855.8 |
| gntr family transcriptional regulator, vanillate catabolism transcriptional regulator | SAMN04488239_116115 | Not Available | Positive | 3893230 - 3893955 | 26387.7 |
| aminomethyltransferase | SAMN04488239_116116 | Not Available | Positive | 3893983 - 3895389 | 53276.8 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN04488239_116117 | Not Available | Positive | 3895540 - 3896520 | 33791.9 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488239_116118 | Not Available | Positive | 3896521 - 3897030 | 18448.3 |
| trap transporter, dctm subunit | SAMN04488239_116119 | Not Available | Positive | 3897027 - 3898331 | 45204.5 |
| catechol 2,3-dioxygenase | SAMN04488239_116120 | Not Available | Positive | 3898343 - 3899299 | 36092.1 |
| 4-oxalomesaconate tautomerase | SAMN04488239_116121 | Not Available | Negative | 3899312 - 3900388 | 37090.3 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | SAMN04488239_116122 | Not Available | Negative | 3900381 - 3901052 | 23404.4 |
| 4-oxalomesaconate hydratase | SAMN04488239_116123 | Not Available | Negative | 3901052 - 3901786 | 27482.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
