Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria marina |
| Strain | strain CGMCC 1.9108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927639 bp
Thymine Count
931575 bp
Guanine Count
1568044 bp
Cytosine Count
1567964 bp
Genome Length
4995422 bp
Protein-coding Genes
4719 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muconate cycloisomerase | SAMN04488239_1164 | Not Available | Positive | 3795187 - 3796314 | 40689.2 |
| predicted transcription regulator, contains hth domain, marr family | SAMN04488239_1165 | Not Available | Negative | 3796326 - 3796841 | 18745.5 |
| d-amino-acid dehydrogenase | SAMN04488239_1166 | Not Available | Positive | 3796962 - 3798227 | 44927.9 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN04488239_1167 | Not Available | Positive | 3798265 - 3799242 | 34827.3 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488239_1168 | Not Available | Positive | 3799308 - 3799829 | 19022.2 |
| trap transporter, dctm subunit | SAMN04488239_1169 | Not Available | Positive | 3799834 - 3801144 | 47370.9 |
| predicted na+-dependent transporter | SAMN04488239_11610 | Not Available | Positive | 3801172 - 3802092 | 32426.1 |
| sensor histidine kinase inhibitor, kipi family | SAMN04488239_11611 | Not Available | Positive | 3802079 - 3802828 | 27144.4 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN04488239_11612 | Not Available | Positive | 3802825 - 3803823 | 34665.6 |
| upf0271 protein | SAMN04488239_11613 | Not Available | Positive | 3803834 - 3804595 | 27009.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
