Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria marina |
| Strain | strain CGMCC 1.9108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927639 bp
Thymine Count
931575 bp
Guanine Count
1568044 bp
Cytosine Count
1567964 bp
Genome Length
4995422 bp
Protein-coding Genes
4719 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN04488239_101334 | Not Available | Positive | 337441 - 338241 | 29086.9 |
| peptide/nickel transport system substrate-binding protein | SAMN04488239_101335 | Not Available | Positive | 338477 - 340141 | 61613.0 |
| peptide/nickel transport system permease protein | SAMN04488239_101336 | Not Available | Positive | 340275 - 341321 | 39035.3 |
| peptide/nickel transport system permease protein | SAMN04488239_101337 | Not Available | Positive | 341337 - 342539 | 43754.9 |
| peptide/nickel transport system atp-binding protein | SAMN04488239_101338 | Not Available | Positive | 342634 - 344721 | 76465.0 |
| transglycosylase slt domain-containing protein | SAMN04488239_101339 | Not Available | Negative | 344925 - 345503 | 21543.7 |
| single-strand binding protein | SAMN04488239_101340 | Not Available | Positive | 345705 - 346223 | 18320.2 |
| zn-dependent protease (includes spoivfb) | SAMN04488239_101341 | Not Available | Positive | 346239 - 347309 | 38471.1 |
| 3-dehydroquinate synthase | SAMN04488239_101342 | Not Available | Negative | 347321 - 348433 | 38856.0 |
| shikimate kinase | SAMN04488239_101343 | Not Available | Negative | 348435 - 349022 | 21347.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
