Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria marina |
| Strain | strain CGMCC 1.9108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927639 bp
Thymine Count
931575 bp
Guanine Count
1568044 bp
Cytosine Count
1567964 bp
Genome Length
4995422 bp
Protein-coding Genes
4719 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ diphosphatase | SAMN04488239_11443 | Not Available | Negative | 3558206 - 3559189 | 35521.4 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase | SAMN04488239_11444 | Not Available | Positive | 3559493 - 3561277 | 64052.4 |
| hypothetical protein | SAMN04488239_11447 | Not Available | Positive | 3562117 - 3562515 | 14300.9 |
| protein tyrosine phosphatase | SAMN04488239_11448 | Not Available | Negative | 3562529 - 3563023 | 17322.9 |
| dna polymerase-3 subunit gamma/tau | SAMN04488239_11449 | Not Available | Positive | 3563189 - 3564949 | 63474.1 |
| acetyltransferase (gnat) family protein | SAMN04488239_11450 | Not Available | Negative | 3565009 - 3565482 | 17122.1 |
| glycine/d-amino acid oxidase | SAMN04488239_11451 | Not Available | Negative | 3565479 - 3566522 | 36669.9 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN04488239_11452 | Not Available | Positive | 3566572 - 3567237 | 24291.6 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488239_11453 | Not Available | Positive | 3567234 - 3568139 | 32966.1 |
| soluble lytic murein transglycosylase | SAMN04488239_11454 | Not Available | Negative | 3568095 - 3570068 | 72550.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
