Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria marina |
| Strain | strain CGMCC 1.9108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927639 bp
Thymine Count
931575 bp
Guanine Count
1568044 bp
Cytosine Count
1567964 bp
Genome Length
4995422 bp
Protein-coding Genes
4719 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate enzyme, n-terminal tpp binding domain | SAMN04488239_10846 | Not Available | Positive | 2524514 - 2525035 | 18505.4 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain | SAMN04488239_10847 | Not Available | Positive | 2524977 - 2525645 | 23459.2 |
| choline dehydrogenase | SAMN04488239_10848 | Not Available | Positive | 2525642 - 2527258 | 59224.6 |
| amp-binding enzyme | SAMN04488239_10849 | Not Available | Positive | 2527354 - 2527845 | 17561.1 |
| amp-binding enzyme c-terminal domain-containing protein | SAMN04488239_10850 | Not Available | Positive | 2528554 - 2528889 | 12477.2 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN04488239_10851 | Not Available | Positive | 2529125 - 2529979 | 30499.4 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488239_10852 | Not Available | Positive | 2530056 - 2530559 | 17721.9 |
| c4-dicarboxylate transporter, dctm subunit | SAMN04488239_10853 | Not Available | Positive | 2530556 - 2531653 | 39212.4 |
| sam domain (sterile alpha motif) | SAMN04488239_10854 | Not Available | Positive | 2531728 - 2534193 | 89847.9 |
| transposase | SAMN04488239_10855 | Not Available | Negative | 2534213 - 2534602 | 14876.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
