Ruegeria marina strain CGMCC 1.9108

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria marina strain CGMCC 1.9108 is a Gram-negative, non-motile rod-shaped bacterium. This strain demonstrates mesophilic characteristics, with an optimal growth temperature of 37°C. The genetic structure of Ruegeria marina strain CGMCC 1.9108 is characterized by the presence of a single replicon, which is an important feature for its genomic stability and replication. Given its optimal temperature and mesophilic nature, Ruegeria marina strain CGMCC 1.9108 is likely well-adapted to moderate environmental conditions, potentially thriving in marine ecosystems where temperatures typically fluctuate around this range. The designation of Gram-negative indicates that this bacterium possesses a thinner peptidoglycan layer in its cell wall, which is characteristic of this group and may influence its interactions with other organisms and its environment. The accession number for this strain is FMZV00000000.1, which provides a reference for genomic studies and can facilitate comparative analysis with other strains or species within the Ruegeria genus. Biologically, the traits of Ruegeria marina strain CGMCC 1.9108 suggest it may play a role in marine nutrient cycling. Its mesophilic nature and adaptation to moderate temperatures might also indicate its potential involvement in ecological interactions within its habitat, such as breaking down organic materials or interacting with marine flora and fauna. Understanding the specific ecological roles of this strain could provide insights into microbial processes in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria marina
Strainstrain CGMCC 1.9108

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruegeria marina strain CGMCC 1.9108 genome assembly, contig:

Gene Summary

Adenine Count

927639 bp

Thymine Count

931575 bp

Guanine Count

1568044 bp

Cytosine Count

1567964 bp

Genome Length

4995422 bp

Protein-coding Genes

4719 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, alpa familySAMN04488239_105168Not AvailableNegative1847459 - 18476296492.97
integraseSAMN04488239_105169Not AvailableNegative1847881 - 184910746100.4
amidaseSAMN04488239_105170Not AvailableNegative1849330 - 185073049702.6
hypothetical proteinSAMN04488239_105171Not AvailablePositive1850966 - 185205737233.9
atp-binding protein involved in chromosome partitioningSAMN04488239_105172Not AvailableNegative1852060 - 185316939898.9
hypothetical proteinSAMN04488239_105173Not AvailableNegative1853225 - 18534287577.21
hypothetical proteinSAMN04488239_105174Not AvailableNegative1853425 - 18536197249.54
taurine dioxygenase, alpha-ketoglutarate-dependentSAMN04488239_105175Not AvailableNegative1853606 - 185453835276.4
dissimilatory sulfite reductase alpha subunitSAMN04488239_105176Not AvailablePositive1854794 - 185608948516.6
dissimilatory sulfite reductase beta subunitSAMN04488239_105177Not AvailablePositive1856114 - 185719640142.4

Displaying genes 1871 – 1880 of 4786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.