Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chat domain-containing protein | SAMN05444679_10389 | Not Available | Positive | 964799 - 970843 | 216530.0 |
| protein of unknown function | SAMN05444679_10390 | Not Available | Positive | 971016 - 971294 | 10460.7 |
| transposase and inactivated derivatives, tnpa family | SAMN05444679_10391 | Not Available | Positive | 971263 - 973938 | 99517.7 |
| hypothetical protein | SAMN05444679_10392 | Not Available | Positive | 973956 - 974363 | 15251.4 |
| 5-methylcytosine-specific restriction enzyme subunit mcrc | SAMN05444679_10393 | Not Available | Negative | 974697 - 975818 | 41464.0 |
| 5-methylcytosine-specific restriction enzyme b | SAMN05444679_10394 | Not Available | Negative | 975824 - 978040 | 83447.6 |
| type i restriction enzyme, r subunit | SAMN05444679_10395 | Not Available | Negative | 978052 - 981036 | 112383.0 |
| type i restriction enzyme, s subunit | SAMN05444679_10396 | Not Available | Negative | 981023 - 982189 | 42972.6 |
| type i restriction enzyme m protein | SAMN05444679_10397 | Not Available | Negative | 982182 - 983708 | 56859.3 |
| type i restriction enzyme m protein | SAMN05444679_10398 | Not Available | Negative | 983705 - 985201 | 56287.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
