Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | SAMN05444679_10379 | Not Available | Negative | 952735 - 954216 | 53722.4 |
| hypothetical protein | SAMN05444679_10380 | Not Available | Positive | 954423 - 954905 | 17089.6 |
| hypothetical protein | SAMN05444679_10381 | Not Available | Positive | 954914 - 956206 | 47035.5 |
| cellulose biosynthesis protein bcsq | SAMN05444679_10382 | Not Available | Positive | 956203 - 957855 | 60887.1 |
| tir domain-containing protein | SAMN05444679_10383 | Not Available | Positive | 957833 - 959035 | 45185.8 |
| hypothetical protein | SAMN05444679_10384 | Not Available | Positive | 959032 - 959826 | 28470.7 |
| hypothetical protein | SAMN05444679_10385 | Not Available | Negative | 959823 - 960986 | 43020.8 |
| hypothetical protein | SAMN05444679_10386 | Not Available | Negative | 961631 - 962308 | 24978.2 |
| m6 family metalloprotease domain-containing protein | SAMN05444679_10387 | Not Available | Negative | 962318 - 963733 | 51605.4 |
| caspase domain-containing protein | SAMN05444679_10388 | Not Available | Positive | 963902 - 964744 | 30229.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
