Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN05444679_10369 | Not Available | Positive | 939383 - 940933 | 57430.1 |
| hypothetical protein | SAMN05444679_10370 | Not Available | Negative | 941198 - 941587 | 14094.0 |
| phage integrase family protein | SAMN05444679_10371 | Not Available | Negative | 941691 - 943049 | 48297.7 |
| replication region dna-binding n-term | SAMN05444679_10372 | Not Available | Positive | 943132 - 944247 | 41462.9 |
| frg domain-containing protein | SAMN05444679_10373 | Not Available | Positive | 944597 - 945262 | 25863.8 |
| hypothetical protein | SAMN05444679_10374 | Not Available | Positive | 945535 - 945825 | 10820.8 |
| hypothetical protein | SAMN05444679_10375 | Not Available | Positive | 945852 - 946274 | 15505.2 |
| transposase | SAMN05444679_10376 | Not Available | Positive | 946507 - 947523 | 37016.3 |
| hypothetical protein | SAMN05444679_10377 | Not Available | Negative | 947735 - 948388 | 24133.2 |
| hypothetical protein | SAMN05444679_10378 | Not Available | Negative | 948360 - 952742 | 159576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
