Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase, is5 family | SAMN05444679_10359 | Not Available | Positive | 927956 - 928354 | 14656.9 |
| gtpase, g3e family | SAMN05444679_10360 | Not Available | Negative | 928895 - 929887 | 35534.6 |
| hypothetical protein | SAMN05444679_10361 | Not Available | Negative | 929889 - 931559 | 60715.9 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_10362 | Not Available | Negative | 931615 - 932649 | 37569.7 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_10363 | Not Available | Negative | 932646 - 933704 | 38384.8 |
| peptide/nickel transport system permease protein | SAMN05444679_10364 | Not Available | Negative | 933707 - 934618 | 32151.8 |
| peptide/nickel transport system permease protein | SAMN05444679_10365 | Not Available | Negative | 934615 - 935583 | 34441.4 |
| peptide/nickel transport system substrate-binding protein | SAMN05444679_10366 | Not Available | Negative | 935599 - 937197 | 57959.4 |
| glycine/d-amino acid oxidase | SAMN05444679_10367 | Not Available | Negative | 937386 - 938834 | 53381.5 |
| ketosteroid isomerase-related protein | SAMN05444679_10368 | Not Available | Negative | 938856 - 939263 | 14433.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
