Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN05444679_10349 | Not Available | Positive | 918311 - 918925 | 22487.5 |
| hypothetical protein | SAMN05444679_10350 | Not Available | Negative | 918931 - 920583 | 62078.7 |
| acetyl-coa acetyltransferase | SAMN05444679_10351 | Not Available | Negative | 920587 - 921732 | 40612.8 |
| hypothetical protein | SAMN05444679_10352 | Not Available | Negative | 921729 - 922142 | 15082.2 |
| acyl dehydratase | SAMN05444679_10353 | Not Available | Negative | 922157 - 922618 | 16468.7 |
| alpha-methylacyl-coa racemase | SAMN05444679_10354 | Not Available | Negative | 922677 - 923756 | 38198.8 |
| fatty-acyl-coa synthase | SAMN05444679_10355 | Not Available | Negative | 923753 - 925309 | 55738.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10356 | Not Available | Negative | 925370 - 926332 | 34293.4 |
| phage integrase protein | SAMN05444679_10357 | Not Available | Positive | 926808 - 927311 | 18184.8 |
| transposase dde domain-containing protein | SAMN05444679_10358 | Not Available | Positive | 927342 - 927989 | 24294.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
