Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | SAMN05444679_10339 | Not Available | Positive | 909199 - 909492 | 10780.7 |
| fumarylacetoacetate (faa) hydrolase family protein | SAMN05444679_10340 | Not Available | Positive | 909489 - 910700 | 42445.8 |
| altronate hydrolase | SAMN05444679_10341 | Not Available | Positive | 910694 - 912265 | 54905.3 |
| catechol 2,3-dioxygenase | SAMN05444679_10342 | Not Available | Negative | 912328 - 912789 | 16905.9 |
| homogentisate 1,2-dioxygenase | SAMN05444679_10343 | Not Available | Negative | 912829 - 913077 | 9134.73 |
| 2,3-dihydroxybenzoate decarboxylase | SAMN05444679_10344 | Not Available | Positive | 913279 - 914253 | 36196.0 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444679_10345 | Not Available | Positive | 914288 - 915058 | 28070.6 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444679_10346 | Not Available | Positive | 915076 - 916074 | 36584.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10347 | Not Available | Positive | 916071 - 917036 | 34527.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_10348 | Not Available | Positive | 917072 - 917860 | 27648.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
