Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444679_10329 | Not Available | Negative | 899451 - 900512 | 38555.7 |
| hypothetical protein | SAMN05444679_10330 | Not Available | Negative | 900582 - 901259 | 24534.7 |
| 2-keto-4-pentenoate hydratase | SAMN05444679_10331 | Not Available | Negative | 901246 - 902040 | 28236.8 |
| predicted dehydrogenase | SAMN05444679_10332 | Not Available | Negative | 902037 - 903107 | 38663.5 |
| transcriptional regulator, iclr family | SAMN05444679_10333 | Not Available | Negative | 903100 - 903906 | 28796.2 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444679_10334 | Not Available | Positive | 904059 - 904970 | 32535.5 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444679_10335 | Not Available | Positive | 904976 - 905809 | 30034.2 |
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN05444679_10336 | Not Available | Positive | 905846 - 907144 | 47005.2 |
| shikimate dehydrogenase | SAMN05444679_10337 | Not Available | Positive | 907196 - 908041 | 29669.8 |
| predicted dehydrogenase | SAMN05444679_10338 | Not Available | Positive | 908038 - 909054 | 37255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
