Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylpyruvate tautomerase ppta, 4-oxalocrotonate tautomerase family | SAMN05444679_10319 | Not Available | Positive | 890115 - 890486 | 13237.0 |
| mfs transporter, aahs family, benzoate transport protein | SAMN05444679_10320 | Not Available | Positive | 890549 - 891904 | 48073.6 |
| hypothetical protein | SAMN05444679_10321 | Not Available | Positive | 891888 - 892640 | 25965.0 |
| uncharacterized conserved protein, duf849 family | SAMN05444679_10322 | Not Available | Positive | 892668 - 893591 | 34010.0 |
| arac family transcriptional regulator | SAMN05444679_10323 | Not Available | Negative | 893625 - 894491 | 31976.9 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05444679_10324 | Not Available | Negative | 894569 - 895453 | 31618.2 |
| fumarylacetoacetate (faa) hydrolase family protein | SAMN05444679_10325 | Not Available | Negative | 896174 - 896584 | 14966.9 |
| sugar phosphate isomerase/epimerase | SAMN05444679_10326 | Not Available | Negative | 896701 - 897513 | 29921.7 |
| glucose 1-dehydrogenase | SAMN05444679_10327 | Not Available | Negative | 897623 - 898414 | 27697.5 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444679_10328 | Not Available | Negative | 898537 - 899430 | 32006.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
