Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator, vanillate catabolism transcriptional regulator | SAMN05444679_102403 | Not Available | Positive | 872051 - 872806 | 27350.0 |
| vanillate demethylase subunit b | SAMN05444679_102404 | Not Available | Positive | 872806 - 873804 | 35610.7 |
| hypothetical protein | SAMN05444679_102405 | Not Available | Positive | 873962 - 874140 | 6350.88 |
| nadh:flavin oxidoreductase / nadh oxidase family protein | SAMN05444679_1031 | Not Available | Negative | 874263 - 874880 | 22519.9 |
| transcriptional regulator, arac family | SAMN05444679_1032 | Not Available | Positive | 875118 - 876137 | 38155.6 |
| mfs transporter, aahs family, benzoate transport protein | SAMN05444679_1033 | Not Available | Positive | 876280 - 877650 | 47840.6 |
| nitroreductase | SAMN05444679_1034 | Not Available | Positive | 877812 - 878552 | 28052.8 |
| fatty-acyl-coa synthase | SAMN05444679_1035 | Not Available | Positive | 878549 - 880201 | 59729.6 |
| acyl dehydratase | SAMN05444679_1036 | Not Available | Positive | 880194 - 880655 | 16486.6 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_1037 | Not Available | Positive | 881095 - 881853 | 25801.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
