Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_10178 | Not Available | Positive | 73427 - 73768 | 11976.4 |
| zn-finger domain of cdgsh type-containing protein | SAMN05444679_10179 | Not Available | Negative | 73808 - 74311 | 18389.3 |
| hypothetical protein | SAMN05444679_10180 | Not Available | Negative | 74452 - 74838 | 14068.7 |
| transcriptional regulatory protein, c terminal | SAMN05444679_10181 | Not Available | Positive | 74961 - 76649 | 60284.9 |
| hypothetical protein | SAMN05444679_10182 | Not Available | Negative | 77086 - 77535 | 15381.6 |
| hypothetical protein | SAMN05444679_10183 | Not Available | Negative | 77830 - 78435 | 21859.2 |
| isoquinoline 1-oxidoreductase, beta subunit | SAMN05444679_10184 | Not Available | Negative | 78435 - 80624 | 77955.4 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN05444679_10185 | Not Available | Negative | 80628 - 81089 | 16543.2 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05444679_10186 | Not Available | Negative | 81276 - 81947 | 24343.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_10187 | Not Available | Positive | 82164 - 82838 | 24740.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
