Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102393 | Not Available | Positive | 860443 - 861417 | 34156.5 |
| 5-dehydro-4-deoxyglucarate dehydratase | SAMN05444679_102394 | Not Available | Positive | 861545 - 862456 | 32667.5 |
| aldehyde dehydrogenase (nad+) | SAMN05444679_102395 | Not Available | Positive | 862562 - 863998 | 50704.5 |
| osmoprotectant transport system permease protein | SAMN05444679_102396 | Not Available | Negative | 864082 - 865620 | 54300.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_102397 | Not Available | Positive | 865806 - 866504 | 25528.1 |
| rok family protein | SAMN05444679_102398 | Not Available | Positive | 866523 - 867593 | 39374.9 |
| cardiolipin synthase | SAMN05444679_102399 | Not Available | Negative | 867590 - 868969 | 50701.2 |
| glutathione s-transferase | SAMN05444679_102400 | Not Available | Negative | 868966 - 869631 | 24810.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | SAMN05444679_102401 | Not Available | Negative | 869670 - 870791 | 41683.9 |
| vanillate demethylase subunit a | SAMN05444679_102402 | Not Available | Positive | 870939 - 872054 | 41358.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
