Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102383 | Not Available | Negative | 850350 - 851342 | 34299.6 |
| 6-phosphogluconolactonase | SAMN05444679_102384 | Not Available | Negative | 851388 - 852485 | 38641.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_102385 | Not Available | Negative | 852514 - 853278 | 26675.1 |
| galactarate dehydratase | SAMN05444679_102386 | Not Available | Negative | 853292 - 854866 | 56109.5 |
| trap transporter, dctm subunit | SAMN05444679_102387 | Not Available | Negative | 854863 - 856161 | 45314.4 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444679_102388 | Not Available | Negative | 856152 - 856691 | 19493.5 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444679_102389 | Not Available | Negative | 856688 - 857656 | 35229.5 |
| gluconolactonase | SAMN05444679_102390 | Not Available | Negative | 857699 - 858589 | 31653.6 |
| uronate dehydrogenase | SAMN05444679_102391 | Not Available | Negative | 858595 - 859422 | 30001.5 |
| dna-binding transcriptional regulator, fadr family | SAMN05444679_102392 | Not Available | Positive | 859489 - 860313 | 29498.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
