Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444679_102373 | Not Available | Negative | 841085 - 841954 | 31380.3 |
| transcriptional regulator, gntr family | SAMN05444679_102374 | Not Available | Positive | 842076 - 842747 | 24710.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102375 | Not Available | Positive | 842856 - 843854 | 35371.1 |
| molybdate transport system substrate-binding protein | SAMN05444679_102376 | Not Available | Positive | 843851 - 844540 | 23500.4 |
| molecular chaperone dnaj | SAMN05444679_102377 | Not Available | Negative | 844551 - 845684 | 40878.4 |
| molecular chaperone dnak | SAMN05444679_102378 | Not Available | Negative | 845767 - 847701 | 69076.2 |
| molecular chaperone grpe | SAMN05444679_102379 | Not Available | Negative | 847806 - 848468 | 23644.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN05444679_102380 | Not Available | Negative | 848506 - 848856 | 12193.3 |
| transcriptional regulator, hxlr family | SAMN05444679_102381 | Not Available | Negative | 848897 - 849256 | 12923.6 |
| phosphatidylserine decarboxylase | SAMN05444679_102382 | Not Available | Negative | 849431 - 850282 | 30835.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
