Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_102363 | Not Available | Negative | 829845 - 830765 | 33383.3 |
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN05444679_102364 | Not Available | Negative | 830758 - 831867 | 39714.1 |
| l-fuconolactonase | SAMN05444679_102365 | Not Available | Negative | 831913 - 832758 | 31102.2 |
| d-threo-aldose 1-dehydrogenase | SAMN05444679_102366 | Not Available | Negative | 832762 - 833736 | 35047.9 |
| 3-dehydroquinate dehydratase | SAMN05444679_102367 | Not Available | Positive | 833789 - 834244 | 16397.8 |
| dna-3-methyladenine glycosylase i | SAMN05444679_102368 | Not Available | Positive | 834251 - 834892 | 24103.8 |
| stage v sporulation protein spovr/ycgb, involved in spore cortex formation | SAMN05444679_102369 | Not Available | Negative | 834885 - 836402 | 59222.0 |
| hypothetical protein | SAMN05444679_102370 | Not Available | Negative | 836399 - 837691 | 49321.8 |
| putative serine protein kinase, prka | SAMN05444679_102371 | Not Available | Negative | 837714 - 839636 | 73340.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102372 | Not Available | Negative | 840060 - 841046 | 34421.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
