Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | SAMN05444679_102353 | Not Available | Positive | 822103 - 822765 | 24561.1 |
| hypothetical protein | SAMN05444679_102354 | Not Available | Negative | 822772 - 823791 | 38044.8 |
| methyltransferase domain-containing protein | SAMN05444679_102355 | Not Available | Negative | 823788 - 824726 | 33966.6 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444679_102356 | Not Available | Negative | 824749 - 825660 | 31888.6 |
| dna-binding transcriptional regulator gbsr, marr family | SAMN05444679_102357 | Not Available | Negative | 825729 - 826307 | 21841.2 |
| dna repair photolyase | SAMN05444679_102358 | Not Available | Positive | 826435 - 827523 | 40821.9 |
| gluconokinase | SAMN05444679_102359 | Not Available | Positive | 827557 - 828066 | 17966.4 |
| 3'-5' exonuclease | SAMN05444679_102360 | Not Available | Negative | 828030 - 828641 | 22425.9 |
| dna transformation protein | SAMN05444679_102361 | Not Available | Negative | 828638 - 828988 | 13464.0 |
| s-formylglutathione hydrolase | SAMN05444679_102362 | Not Available | Negative | 828985 - 829848 | 31078.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
