Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN05444679_102343 | Not Available | Negative | 813200 - 813604 | 14648.2 |
| pp_00823 | SAMN05444679_102344 | Not Available | Positive | 813656 - 814873 | Not Available |
| thioredoxin | SAMN05444679_102345 | Not Available | Positive | 814854 - 815294 | 16035.1 |
| nad(p)h-binding | SAMN05444679_102346 | Not Available | Positive | 815299 - 815961 | 24019.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_102347 | Not Available | Negative | 815945 - 816757 | 28656.4 |
| o-acetylhomoserine sulfhydrylase | SAMN05444679_102348 | Not Available | Negative | 816757 - 818067 | 46307.3 |
| cbs domain-containing protein | SAMN05444679_102349 | Not Available | Positive | 818206 - 818655 | 16624.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102350 | Not Available | Negative | 818660 - 819643 | 33947.5 |
| adenosine deaminase | SAMN05444679_102351 | Not Available | Negative | 819646 - 820728 | 40780.2 |
| poly(3-hydroxybutyrate) depolymerase | SAMN05444679_102352 | Not Available | Negative | 820763 - 821980 | 45290.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
