Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted nucleotide-utilizing enzyme | SAMN05444679_102323 | Not Available | Positive | 796121 - 796924 | 28965.0 |
| l-glutamine synthetase | SAMN05444679_102324 | Not Available | Positive | 797072 - 798487 | 52267.1 |
| hypothetical protein | SAMN05444679_102325 | Not Available | Positive | 798619 - 799122 | 18065.2 |
| signal transduction histidine kinase, nitrogen specific, ntrb | SAMN05444679_102326 | Not Available | Positive | 799122 - 800198 | 40034.1 |
| two-component system, ntrc family, nitrogen regulation response regulator glng | SAMN05444679_102327 | Not Available | Positive | 800221 - 801759 | 55202.2 |
| hypothetical protein | SAMN05444679_102328 | Not Available | Negative | 801776 - 802288 | 18428.2 |
| exodeoxyribonuclease-3 | SAMN05444679_102329 | Not Available | Negative | 802285 - 803064 | 29345.0 |
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN05444679_102330 | Not Available | Positive | 803364 - 804446 | 40099.8 |
| hypothetical protein | SAMN05444679_102331 | Not Available | Positive | 804443 - 804595 | 5270.25 |
| hypothetical protein | SAMN05444679_102332 | Not Available | Negative | 804705 - 805139 | 15458.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
