Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-demethylubiquinone-9 3-methyltransferase | SAMN05444679_102313 | Not Available | Positive | 786350 - 787072 | 26682.1 |
| phosphoglycolate phosphatase | SAMN05444679_102314 | Not Available | Positive | 787069 - 787740 | 23771.6 |
| Tmrna,resume consensus sequence (at 84): actaactgcaaacgacga | Not Available | Not Available | Positive | 787753 - 788140 | Not Available |
| regulatory domain of a methyltransferase-containing protein | SAMN05444679_102316 | Not Available | Positive | 788314 - 789906 | 58176.1 |
| gamma-glutamyltransferase 1 threonine peptidase. merops family t03 | SAMN05444679_102317 | Not Available | Positive | 789932 - 791668 | 60961.2 |
| ribosomal small subunit pseudouridine synthase a | SAMN05444679_102318 | Not Available | Positive | 791668 - 792426 | 27716.5 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN05444679_102319 | Not Available | Positive | 792457 - 793443 | 35722.9 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05444679_102320 | Not Available | Positive | 793430 - 794227 | 28900.6 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05444679_102321 | Not Available | Positive | 794244 - 795215 | 36934.6 |
| etoposide-induced protein 2.4 (ei24) | SAMN05444679_102322 | Not Available | Positive | 795252 - 796124 | 31641.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
