Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized integral membrane protein | SAMN05444679_102303 | Not Available | Negative | 774430 - 774741 | 10967.5 |
| integration host factor subunit beta | SAMN05444679_102304 | Not Available | Negative | 774774 - 775088 | 11735.0 |
| ssu ribosomal protein s1p | SAMN05444679_102305 | Not Available | Negative | 775137 - 776822 | 61762.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05444679_102306 | Not Available | Negative | 776992 - 779025 | 72710.7 |
| prephenate dehydrogenase | SAMN05444679_102307 | Not Available | Negative | 778992 - 779870 | 30716.1 |
| chorismate mutase | SAMN05444679_102308 | Not Available | Negative | 779879 - 780997 | 40331.1 |
| phosphoserine aminotransferase apoenzyme | SAMN05444679_102309 | Not Available | Negative | 781017 - 782132 | 40379.2 |
| hypothetical protein | SAMN05444679_102310 | Not Available | Negative | 782129 - 782710 | 20652.1 |
| dna gyrase subunit a | SAMN05444679_102311 | Not Available | Negative | 782707 - 785355 | 98114.5 |
| ompa-ompf porin, oop family | SAMN05444679_102312 | Not Available | Positive | 785579 - 786235 | 23034.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
