Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multisubunit potassium/proton antiporter, phad subunit | SAMN05444679_102293 | Not Available | Negative | 764356 - 766062 | 59065.0 |
| multisubunit potassium/proton antiporter, phac subunit | SAMN05444679_102294 | Not Available | Negative | 766059 - 766412 | 12446.5 |
| multisubunit potassium/proton antiporter, phaa subunit /multisubunit potassium/proton antiporter, phab subunit | SAMN05444679_102295 | Not Available | Negative | 766412 - 769351 | 106120.0 |
| camphor resistance protein crcb | SAMN05444679_102296 | Not Available | Negative | 769395 - 769772 | 13073.4 |
| trap transporter, dctm subunit | SAMN05444679_102297 | Not Available | Negative | 769778 - 771091 | 46834.1 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444679_102298 | Not Available | Negative | 771092 - 771625 | 19645.2 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444679_102299 | Not Available | Negative | 771629 - 772597 | 34785.8 |
| hypothetical protein | SAMN05444679_102300 | Not Available | Negative | 772771 - 772941 | 5497.57 |
| helix-hairpin-helix motif-containing protein | SAMN05444679_102301 | Not Available | Negative | 772938 - 773108 | 5910.28 |
| lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domain | SAMN05444679_102302 | Not Available | Negative | 773256 - 774440 | 43886.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
