Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance transporter, emrb/qaca subfamily | SAMN05444679_102283 | Not Available | Negative | 758119 - 759579 | 50237.1 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444679_102284 | Not Available | Negative | 759576 - 760109 | 19447.6 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444679_102285 | Not Available | Negative | 760125 - 760919 | 26793.3 |
| hypothetical protein | SAMN05444679_102286 | Not Available | Negative | 761043 - 761372 | 12676.6 |
| hypothetical protein | SAMN05444679_102287 | Not Available | Positive | 761530 - 761727 | 7547.99 |
| non-heme chloroperoxidase | SAMN05444679_102288 | Not Available | Positive | 761835 - 762659 | 29759.6 |
| uncharacterized membrane protein | SAMN05444679_102289 | Not Available | Negative | 762649 - 763170 | 18430.9 |
| multisubunit potassium/proton antiporter, phag subunit | SAMN05444679_102290 | Not Available | Negative | 763246 - 763593 | 12422.6 |
| multisubunit potassium/proton antiporter, phaf subunit | SAMN05444679_102291 | Not Available | Negative | 763590 - 763868 | 9983.99 |
| multisubunit potassium/proton antiporter, phae subunit | SAMN05444679_102292 | Not Available | Negative | 763865 - 764359 | 17996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
