Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN05444679_102273 | Not Available | Positive | 749016 - 749822 | 28621.7 |
| hypothetical protein | SAMN05444679_102274 | Not Available | Negative | 749819 - 749959 | 5433.62 |
| riboflavin-specific deaminase c-terminal domain-containing protein | SAMN05444679_102275 | Not Available | Negative | 750070 - 750927 | 30464.1 |
| hypothetical protein | SAMN05444679_102276 | Not Available | Negative | 750951 - 751817 | 30288.0 |
| glutathione s-transferase | SAMN05444679_102277 | Not Available | Negative | 751847 - 752518 | 25089.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102278 | Not Available | Negative | 752551 - 753558 | 33935.5 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05444679_102279 | Not Available | Negative | 753555 - 755483 | 69317.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_102280 | Not Available | Negative | 755629 - 756519 | 32172.9 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05444679_102281 | Not Available | Positive | 756606 - 757814 | 42032.7 |
| hypothetical protein | SAMN05444679_102282 | Not Available | Negative | 757815 - 758036 | 8064.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
